BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F08LP1|AL428943
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1688 1765 0.0
>3x_Contig1688
Length = 18058
Score = 1765 bits (889), Expect = 0.0
Identities = 900/904 (99%), Gaps = 1/904 (0%)
Strand = Plus / Minus
Query: 1 aaacatgtcgcgatttgtaggcggacgactgacaccttttcataattggcaggatatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11445 aaacatgtcgcgatttgtaggcggacgactgacaccttttcataattggcaggatatagc 11386
Query: 61 acaacttcttcgccttcgtaccatgtcttgcgcar-anctcactaccggattcatcaatt 119
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 11385 acaacttcttcgccttcgtaccatgtcttgcgcagcaactcactaccggattcatcaatt 11326
Query: 120 tcaaaagcttgctctgtatggatatcatcgccacctttcggtaaagttgagttgatcaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11325 tcaaaagcttgctctgtatggatatcatcgccacctttcggtaaagttgagttgatcaaa 11266
Query: 180 gggaatgctgtgctatcatcgaagtcatttaactcaaaatcttccacctggacagatttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11265 gggaatgctgtgctatcatcgaagtcatttaactcaaaatcttccacctggacagatttt 11206
Query: 240 cttgtcgtttgggcataatcatcttcgcccttcattatacaaattgaacttttgtcttga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11205 cttgtcgtttgggcataatcatcttcgcccttcattatacaaattgaacttttgtcttga 11146
Query: 300 tgagcttctgtagcagcctaattcttgtttcttagcagcaatctacacaacaccggccat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11145 tgagcttctgtagcagcctaattcttgtttcttagcagcaatctacacaacaccggccat 11086
Query: 360 tgacttgtatctaccaaaatacgtatacgttcaagaatatgaatatatatatgcttcaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11085 tgacttgtatctaccaaaatacgtatacgttcaagaatatgaatatatatatgcttcaaa 11026
Query: 420 aataaacgtttaaccacacttcgggtacacatatgtttttgtcttagagctaacaatatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11025 aataaacgtttaaccacacttcgggtacacatatgtttttgtcttagagctaacaatatg 10966
Query: 480 ttagtagaactttagcaattcaacttacacttcgtaattgcagtagatactgatttctaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10965 ttagtagaactttagcaattcaacttacacttcgtaattgcagtagatactgatttctaa 10906
Query: 540 cactcgaatgactgtkataaagaacaaaccaaaccctaacaccacaggcaattactgtca 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10905 cactcgaatgactgttataaagaacaaaccaaaccctaacaccacaggcaattactgtca 10846
Query: 600 gcaaagtcatcaaaggccgagcgaccctgcattttagtacgaacacaagggtatttctcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10845 gcaaagtcatcaaaggccgagcgaccctgcattttagtacgaacacaagggtatttctcc 10786
Query: 660 catcgactaattgtccgcggaaccagacatatcctgactgcaataagctatgccccgtga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10785 catcgactaattgtccgcggaaccagacatatcctgactgcaataagctatgccccgtga 10726
Query: 720 gtatggagccatctggctgtcattgagatttaccttcaaactgcttgttctagggttttt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10725 gtatggagccatctggctgtcattgagatttaccttcaaactgcttgttctagggttttt 10666
Query: 780 tgaaaatcaccttcgaaaatccggttccagttagagtttttcgtactggccgtttttaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10665 tgaaaatcaccttcgaaaatccggttccagttagagtttttcgtactggccgtttttaca 10606
Query: 840 agactttttacctaattctgctagatattccccttttctccagcagatggcggtatatga 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10605 agactttttacctaattctgctagatattccccttttctccagcagatggcggtatatga 10546
Query: 900 tacg 903
||||
Sbjct: 10545 tacg 10542
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6353
Number of Sequences: 1807
Number of extensions: 6353
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)